Program blastn blastp blastx tblastn tblastx Database Synechocystis Arabidopsis Peptides Arabidopsis CDS Galdieria ESTs Galdieria Clusters Galdieria Genome data (Oct 13, 2005) Galdieria Genome contigs (Oct 13, 2005) Galdieria Genome contigs (Build 2.0) Galdieria Genome supercontigs (Build 3.0, May 2007) CDS prediction from Build 3.0 (Aug 2007) Peptide prediction from Build 3.0 (Aug 2007) Augustus CDS predictions (Jan 2006) Augustus peptide predictions (Jan 2006) Augustus CDS predictions, ab initio (May 2006) Augustus peptide predictions, ab initio (May 2006) Augustus CDS predictions, with hints (May 2006) Augustus peptide predictions, with hints (May 2006) Augustus CDS predictions, with 454 hints (July 2006) Augustus peptide predictions, with 454 hints (July 2006) E. coli
Enter sequence below in FASTA format Or load it from disk
Expect 0.0001 0.01 1 10 100 1000 Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15) Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF
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