Protein Properties
Description Fad-Linked Oxidoreductase Family
Comment similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) (Eschscholzia californica); contains PF01565 FAD binding domain
Classification Bacteria
TIGR ID At1g01980
GB AC020622
Gene Family based on BLASTCLUST Family Size: 27
Expert gene family (data source: TAIR)
(Super Gene Family / Gene Family)		 Membrane proteins / Reticuline oxidase-like family
MW (TIGR) 60102.67
pI (TIGR) 9.1512
EC Analysis (KEGG) N/A
External Links [TIGR]  [MIPS]  [TAIR]  [SIGnAL]

Subcellular Localization (TargetP Prediction)
Localization Chloroplast
Score		 Mitochondrial
Score		 Secretory
Score		 Signal Length Reliability Class
Secretory .172 .006 .821 33 2

Gene Expression in different plant organs
EST data
Singleton Total # ESTs Seeds Roots Leaves Flowers Siliques Seedlings Cell Suspension Mixed Tissues
NP302931|AC020622.3|AAF76476.1 1 No EST Breakdown Available
AFGC microarray data (Log2 of normalized ratio)
Flower vs. Leaves Stem vs. Ref. Silique vs. Ref. Root vs. Ref. Flower vs. Ref. Leaf vs. Ref.
No microarray data available

Membrane/Soluble (TMHMM Prediction)
Location Expected # of AA Expected # of AA in first 60 Predicted Helices Topology
soluble 3.16 1.98 0 o

MIPS Automatic Functional Classification
Category Number Description Hitcode P-value
01.20.17.09 Biosynthesis Of Alkaloids At4g20840 0.0
01.20.99 Other Secondary Metabolism Activities At4g29740 1e-112
20.20.18 Plant Hormonal Regulation At3g63440 1e-108
01.20 Secondary Metabolism At3g63440 1e-108
01.20.17 Biosynthesis Of Secondary Products Derived From Primary Amino Acids bg12424 1e-107
01.05.01 C-Compound And Carbohydrate Utilization bg12231 8e-93
02.16 Fermentation YDL174c 4e-69
40.16 Mitochondrion YDL174c 4e-69

Gene Ontology
Accession Description Type Code Evidence Reference Synonym
GO:0008246 electron transfer flavoprotein function ISS TIGR_Ath1:annotation INTERPRO:IPR001575

Protein Domain Analysis
Accession Description Score
No HMM data available

Signal-P Analysis
Prediction SA Probability SP Probability Cleavage Prob. Position
Signal Peptide 0.000 1.000 0.701 20