![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Peroxidase, Putative |
| Comment | similar to peroxidase; peroxidase ATP11a (Arabidopsis thaliana) gi|1546688|emb|CAA67334 |
| Classification | Plant Specific |
| TIGR ID | At1g05250 |
| GB | AC000098 |
| Gene Family based on BLASTCLUST | Family Size: 67 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | NA / Class III peroxidase |
| MW (TIGR) | 35624.28 |
| pI (TIGR) | 9.7276 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Secretory | .009 | .012 | .986 | 23 | 1 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| No EST Breakdown Available | |||||||||
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| 0 | -.2435 | ||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 19.99 | 19.71 | 1 | i7-26o |
| Category Number | Description | Hitcode | P-value |
| 11.07 | Detoxification | At3g50990 | 1e-120 |
| 11.05 | Disease, Virulence And Defense | At4g08770 | 1e-119 |
| 11.07.99 | Other Detoxification | At5g15180 | 1e-119 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0004601 | peroxidase | function | ISS | TIGR_Ath1:annotation | Pfam:PF00141 | |
| GO:0006804 | peroxidase reaction | process | ISS | TIGR_Ath1:annotation | Pfam:PF00141 | |
| GO:0008372 | cellular_component unknown | component | ND | GO_REF:nd |
| Accession | Description | Score |
| PF00141 | Peroxidase | 430.4 |
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Signal Peptide | 0.002 | 0.998 | 0.796 | 21 |