![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Mitochondrial Inner Membrane Translocase Component -Related |
| Comment | similar to mitochondrial inner membrane translocase component Tim17a GI:4378524 from (Mus musculus) |
| Classification | Eukaryotes |
| TIGR ID | At1g20350 |
| GB | AC026234 |
| Gene Family based on BLASTCLUST | Family Size: 2 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | Membrane proteins / Mitochondrial Protein translocase (MPt) Family |
| MW (TIGR) | 22906.61 |
| pI (TIGR) | 6.5107 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Not Defined | .137 | .064 | .021 | N/A | 2 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC168586 | 4 | 0 (0.00%) | 0 (0.00%) | 1 (0.03%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) |
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| No microarray data available | |||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 11.94 | 3.72 | 0 | o |
| Category Number | Description | Hitcode | P-value |
| 40.16 | Mitochondrion | gi_7298231 | 4e-67 |
| 06.04 | Protein Targeting, Sorting And Translocation | gi_7298231 | 4e-67 |
| 67 | Transport Facilitation | gi_7298231 | 4e-67 |
| 30.16 | Mitochondrion | IPI00032296 | 5e-58 |
| 40.02 | Plasma Membrane | IPI00016207 | 6e-58 |
| 67.99 | Other Transport Facilitators | YJL143w | 5e-54 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| No Gene Ontology data available | ||||||
| Accession | Description | Score |
| No HMM data available | ||
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Non-Secretory Protein | 0.014 | 0.000 | 0.000 | 32 |