Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University
| The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Glycosyl Hydrolase Family 63 |
| Comment | similar to alpha-glucosidase I from GI:16506680 (Arabidopsis thaliana) |
| Classification | Eukaryotes |
| TIGR ID | At1g24320 |
| GB | AC002396 |
| Gene Family based on BLASTCLUST | Family Size: 2 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | glycoside Hydrolase gene Families / glycoside Hydrolase Family 63 |
| MW (TIGR) | 96402.25 |
| pI (TIGR) | 6.4857 |
| EC Analysis (KEGG) | putative glucosidase [3.2.1.106] |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Not Defined | .379 | .045 | .054 | N/A | 3 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC156140 | 5 | 0 (0.00%) | 2 (0.01%) | 1 (0.03%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) |
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| No microarray data available | |||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | .16 | 0 | 0 | o |
| Category Number | Description | Hitcode | P-value |
| 01.05 | C-Compound And Carbohydrate Metabolism | IPI00015021 | 0.0 |
| 01.05.01 | C-Compound And Carbohydrate Utilization | YGL027c | 0.0 |
| 30.01 | Cell Wall | YGL027c | 0.0 |
| 40.07 | Endoplasmic Reticulum | IPI00015021 | 0.0 |
| 01 | Metabolism | IPI00015021 | 0.0 |
| 01.05.01.01.02 | Polysaccharide Degradation | c2000917 | 0.0 |
| 06.07 | Protein Modification | IPI00015021 | 0.0 |
| 05 | Protein Synthesis | IPI00015021 | 0.0 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0004558 | alpha-glucosidase | function | ISS | TIGR_Ath1:annotation | TIGR_Ath1:At1g67490 | maltase |
| Accession | Description | Score |
| PF03200 | Mannosyl oligosaccharide glucosidase | 1875.3 |
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Non-Secretory Protein | 0.000 | 0.000 |