![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Plasma Membrane Associated Protein -Related |
| Comment | similar to GI:6851373 from (Hordeum vulgare) |
| Classification | Plant Specific |
| TIGR ID | At1g29520 |
| GB | AC068667 |
| Gene Family based on BLASTCLUST | Family Size: 3 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | Membrane proteins / Similarity to triticum ABA induced membrane protein family |
| MW (TIGR) | 16812.83 |
| pI (TIGR) | 9.1763 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Secretory | .001 | .052 | .81 | 30 | 3 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC156134 | 5 | No EST Breakdown Available | |||||||
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| No microarray data available | |||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 88.19 | 22.25 | 4 | i13-32o62-84i96-118o133-155i |
| Category Number | Description | Hitcode | P-value |
| 40.02 | Plasma Membrane | At5g18970 | 3e-59 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0005554 | molecular_function unknown | function | ISS | TAIR:Communication:1674994 |
| Accession | Description | Score |
| No HMM data available | ||
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Signal Peptide | 0.391 | 0.396 | 0.115 | 26 |