Protein Properties
Description Glycosyl Hydrolase Family 19 (Chitinase)
Comment similar to basic endochitinase CHB4 precursor SP:Q06209 from (Brassica napus)
Classification Bacteria
TIGR ID At1g56680
GB AC009323
Gene Family based on BLASTCLUST Family Size: 9
Expert gene family (data source: TAIR)
(Super Gene Family / Gene Family)		 glycoside Hydrolase gene Families / glycoside Hydrolase Family 19
MW (TIGR) 31182.78
pI (TIGR) 8.6584
EC Analysis (KEGG) N/A
External Links [TIGR]  [MIPS]  [TAIR]  [SIGnAL]

Subcellular Localization (TargetP Prediction)
Localization Chloroplast
Score		 Mitochondrial
Score		 Secretory
Score		 Signal Length Reliability Class
Secretory .004 .014 .981 24 1

Gene Expression in different plant organs
EST data
TC Total # ESTs Seeds Roots Leaves Flowers Siliques Seedlings Cell Suspension Mixed Tissues
TC170177 2 No EST Breakdown Available
AFGC microarray data (Log2 of normalized ratio)
Flower vs. Leaves Stem vs. Ref. Silique vs. Ref. Root vs. Ref. Flower vs. Ref. Leaf vs. Ref.
No microarray data available

Membrane/Soluble (TMHMM Prediction)
Location Expected # of AA Expected # of AA in first 60 Predicted Helices Topology
soluble 16.2 16.19 1 i12-29o

MIPS Automatic Functional Classification
Category Number Description Hitcode P-value
11.05.03 Defense Related Proteins At3g54420 1e-100
30.01 Cell Wall At4g01700 1e-70
01.05 C-Compound And Carbohydrate Metabolism T26F2.1 2e-70
13.11 Cellular Sensing And Response T26F2.1 2e-70
11.01 Stress Response T26F2.1 2e-70

Gene Ontology
Accession Description Type Code Evidence Reference Synonym
GO:0004568 chitinase function ISS TIGR_Ath1:annotation INTERPRO:IPR000726

Protein Domain Analysis
Accession Description Score
No HMM data available

Signal-P Analysis
Prediction SA Probability SP Probability Cleavage Prob. Position
Signal Peptide 0.009 0.989 0.786 28