Protein Properties
Description Aaa-Type Atpase -Related
Comment N/A
Classification Common To All
TIGR ID At2g29080
GB AC005315
Gene Family based on BLASTCLUST Family Size: 11
Expert gene family (data source: TAIR)
(Super Gene Family / Gene Family)		 Membrane proteins / Cell division protein FtsH-like protein family
MW (TIGR) 89352.54
pI (TIGR) 7.2927
EC Analysis (KEGG) putative AAA-type ATPase [3.4.24.-]
External Links [TIGR]  [MIPS]  [TAIR]  [SIGnAL]

Subcellular Localization (TargetP Prediction)
Localization Chloroplast
Score		 Mitochondrial
Score		 Secretory
Score		 Signal Length Reliability Class
Mitochondria .123 .789 .014 56 2

Gene Expression in different plant organs
EST data
TC Total # ESTs Seeds Roots Leaves Flowers Siliques Seedlings Cell Suspension Mixed Tissues
TC150565 24 0 (0.00%) 3 (0.01%) 0 (0.00%) 0 (0.00%) 2 (0.02%) 2 (0.03%) 0 (0.00%) 6 (0.01%)
AFGC microarray data (Log2 of normalized ratio)
Flower vs. Leaves Stem vs. Ref. Silique vs. Ref. Root vs. Ref. Flower vs. Ref. Leaf vs. Ref.
.362 0 -1.631

Membrane/Soluble (TMHMM Prediction)
Location Expected # of AA Expected # of AA in first 60 Predicted Helices Topology
soluble 15.38 0 0 o

MIPS Automatic Functional Classification
Category Number Description Hitcode P-value
06.10 Assembly Of Protein Complexes YER017c 0.0
40.07 Endoplasmic Reticulum gi_7294008 0.0
40.16 Mitochondrion YER017c 0.0
63.19 Nucleotide Binding IPI00001091 0.0
06.13.99 Other Proteolytic Degradation YER017c 0.0
06.01 Protein Folding And Stabilization IPI00001091 0.0
06.13 Proteolytic Degradation IPI00001091 0.0
02.13 Respiration YMR089c 0.0
35.03.17 Nervous Tissue IPI00010483 1e-178
25.05.13 Neurogenesis IPI00010483 1e-178
33.03.13 Neuron IPI00010483 1e-178

Gene Ontology
Accession Description Type Code Evidence Reference Synonym
No Gene Ontology data available

Protein Domain Analysis
Accession Description Score
TIGR01241 ATP-dependent metalloprotease FtsH 941.2

Signal-P Analysis
Prediction SA Probability SP Probability Cleavage Prob. Position
Non-Secretory Protein 0.000 0.030 0.022 39