![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Axi 1 Protein From Nicotiana Tabacum -Related |
| Comment | N/A |
| Classification | Plant Specific |
| TIGR ID | At2g44500 |
| GB | AC004521 |
| Gene Family based on BLASTCLUST | Family Size: 3 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | Membrane proteins / axi 1-like family |
| MW (TIGR) | 64584.85 |
| pI (TIGR) | 9.5924 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Chloroplast | .643 | .06 | .002 | 92 | 3 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC151350 | 17 | 5 (0.05%) | 3 (0.01%) | 0 (0.00%) | 1 (0.01%) | 1 (0.01%) | 1 (0.02%) | 0 (0.00%) | 0 (0.00%) |
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| .9215 | .876 | .768 | .596 | .545 | -.2705 | ||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| membrane | 27.11 | 1.85 | 1 | i59-81o |
| Category Number | Description | Hitcode | P-value |
| 14.01.05 | Growth Regulators / Regulation Of Cell Size | At4g38390 | 0.0 |
| 11.01 | Stress Response | At4g24530 | 1e-160 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| No Gene Ontology data available | ||||||
| Accession | Description | Score |
| PF03138 | Plant protein family | 691.6 |
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Signal Anchor | 0.850 | 0.000 | 0.000 | 78 |