Protein Properties
Description Senescence-Associated Protein Family
Comment similar to senescence-associated protein 5 (Hemerocallis hybrid cultivar) gi|3551954|gb|AAC34855
Classification Plant Specific
TIGR ID At3g12090
Gene Family based on BLASTCLUST Family Size: 12
Expert gene family (data source: TAIR)
(Super Gene Family / Gene Family)		 Membrane proteins / Senescence-associated protein homolog family
MW (TIGR) 13998
pI (TIGR) 7.3362
EC Analysis (KEGG) N/A
External Links [TIGR]  [MIPS]  [TAIR]  [SIGnAL]

Subcellular Localization (TargetP Prediction)
Localization Chloroplast
Score		 Mitochondrial
Score		 Secretory
Score		 Signal Length Reliability Class
Not Defined .072 .109 .088 N/A 1

Gene Expression in different plant organs
EST data
TC Total # ESTs Seeds Roots Leaves Flowers Siliques Seedlings Cell Suspension Mixed Tissues
No EST Breakdown Available
AFGC microarray data (Log2 of normalized ratio)
Flower vs. Leaves Stem vs. Ref. Silique vs. Ref. Root vs. Ref. Flower vs. Ref. Leaf vs. Ref.
1.603 0 -.0305 -.1845 -.251 -1.184

Membrane/Soluble (TMHMM Prediction)
Location Expected # of AA Expected # of AA in first 60 Predicted Helices Topology
membrane 22.08 2.68 1 i60-82o

MIPS Automatic Functional Classification
Category Number Description Hitcode P-value
14.20 Cell Aging At3g45600 1e-113
25.03 Plant Development At5g60220 6e-96

Gene Ontology
Accession Description Type Code Evidence Reference Synonym
GO:0005554 molecular_function unknown function ND GO_REF:nd
GO:0016280 senescence process ISS TIGR_Ath1:annotation NCBI_gi:3551954

Protein Domain Analysis
Accession Description Score
No HMM data available

Signal-P Analysis
Prediction SA Probability SP Probability Cleavage Prob. Position
No Signal-P data available