![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Mannosyl-Oligosaccharide 1,2-Alpha-Mannosidase, Putative |
| Comment | similar to mannosyl-oligosaccharide 1,2-alpha-mannosidase (Glycine max)(GI:6552504) |
| Classification | Eukaryotes |
| TIGR ID | At3g21160 |
| GB | AP000604 |
| Gene Family based on BLASTCLUST | Family Size: 2 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | glycoside Hydrolase gene Families / glycoside Hydrolase Family 47 |
| MW (TIGR) | 65136.02 |
| pI (TIGR) | 6.431 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Mitochondria | .021 | .895 | .023 | 12 | 1 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC156022 | 4 | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 1 (0.01%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) |
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| No microarray data available | |||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 15.77 | 15.64 | 1 | i28-45o |
| Category Number | Description | Hitcode | P-value |
| 01.05 | C-Compound And Carbohydrate Metabolism | IPI00018145 | 0.0 |
| 63.17.01 | Calcium Binding | IPI00009145 | 0.0 |
| 40.07 | Endoplasmic Reticulum | IPI00018145 | 0.0 |
| 40.08 | Golgi | IPI00018145 | 0.0 |
| 01 | Metabolism | IPI00009145 | 0.0 |
| 40.02 | Plasma Membrane | c1002003 | 0.0 |
| 01.05.01.01.02 | Polysaccharide Degradation | c1002003 | 0.0 |
| 06.07 | Protein Modification | IPI00009145 | 0.0 |
| 05 | Protein Synthesis | IPI00009145 | 0.0 |
| 40 | Subcellular Localisation | IPI00009145 | 0.0 |
| 01.05.01.01.01 | Sugar, Glucoside, Polyol And Carboxylate Catabolism | c1000623 | 0.0 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0000137 | Golgi cis cisterna | component | ISS | PMID:10594100 | ||
| GO:0004571 | mannosyl-oligosaccharide 1\,2-alpha-mannosidase | function | ISS | PMID:10594100 | INTERPRO:IPR001382 | |
| GO:0006487 | N-linked glycosylation | process | ISS | TIGR_Ath1:annotation | INTERPRO:IPR001382 |
| Accession | Description | Score |
| No HMM data available | ||
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Signal Anchor | 0.853 | 0.146 | 0.051 | 44 |