![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Glycosyl Hydrolase Family 17 |
| Comment | similar to glucan endo-1,3-beta-glucosidase precursor SP:P52409 from (Triticum aestivum) |
| Classification | Plant Specific |
| TIGR ID | At3g46570 |
| GB | AL133314 |
| Gene Family based on BLASTCLUST | Family Size: 23 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | Membrane proteins / Beta-1,3-glucanase family; glycoside Hydrolase gene Families / glycoside Hydrolase Family 17 |
| MW (TIGR) | 39189.88 |
| pI (TIGR) | 7.9386 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Secretory | .001 | .131 | .963 | 24 | 1 |
| EST data | |||||||||
| Singleton | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| NP162720|AL133314.1|CAB62327.1 | 1 | No EST Breakdown Available | |||||||
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| No microarray data available | |||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 28.71 | 21.47 | 1 | i7-29o |
| Category Number | Description | Hitcode | P-value |
| 01.05 | C-Compound And Carbohydrate Metabolism | At3g46570 | 1e-129 |
| 11.05.03 | Defense Related Proteins | At3g46570 | 1e-129 |
| 01.05.01 | C-Compound And Carbohydrate Utilization | At3g55430 | 1e-122 |
| 01.05.01.01 | C-Compound, Carbohydrate Catabolism | At5g20340 | 1e-111 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0004553 | hydrolase\, hydrolyzing O-glycosyl compounds | function | ISS | TIGR_Ath1:annotation | INTERPRO:IPR000490 | O-glucosyl hydrolase |
| Accession | Description | Score |
| No HMM data available | ||
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Signal Peptide | 0.005 | 0.993 | 0.880 | 24 |