Protein Properties
Description Beta-Ketoacyl-Coa Synthase Family
Comment beta-ketoacyl-CoA synthase - Simmondsia chinensis,PID:g1045614
Classification Bacteria
TIGR ID At3g52160
GB AL049711
Gene Family based on BLASTCLUST Family Size: 21
Expert gene family (data source: TAIR)
(Super Gene Family / Gene Family)		 Acyl-lipid metabolism / Ketoacyl-CoA Synthase; Membrane proteins / Strong similarity to beta-keto-Coa synthase family
MW (TIGR) 51109.27
pI (TIGR) 9.6511
EC Analysis (KEGG) N/A
External Links [TIGR]  [MIPS]  [TAIR]  [SIGnAL]

Subcellular Localization (TargetP Prediction)
Localization Chloroplast
Score		 Mitochondrial
Score		 Secretory
Score		 Signal Length Reliability Class
Not Defined .011 .167 .014 N/A 1

Gene Expression in different plant organs
EST data
TC Total # ESTs Seeds Roots Leaves Flowers Siliques Seedlings Cell Suspension Mixed Tissues
TC158476 3 0 (0.00%) 0 (0.00%) 0 (0.00%) 1 (0.01%) 0 (0.00%) 0 (0.00%) 0 (0.00%) 0 (0.00%)
AFGC microarray data (Log2 of normalized ratio)
Flower vs. Leaves Stem vs. Ref. Silique vs. Ref. Root vs. Ref. Flower vs. Ref. Leaf vs. Ref.
No microarray data available

Membrane/Soluble (TMHMM Prediction)
Location Expected # of AA Expected # of AA in first 60 Predicted Helices Topology
soluble 54.62 22.58 2 o34-56i63-85o

MIPS Automatic Functional Classification
Category Number Description Hitcode P-value
01.06.01 Lipid, Fatty-Acid And Isoprenoid Biosynthesis At3g52160 1e-174
01.06.01.07 Isoprenoid Biosynthesis At5g04530 1e-119
01.20.35.01 Biosynthesis Of Phenylpropanoids At4g34850 2e-78
01.06.01.05 Fatty Acid Biosynthesis gi_16411672 5e-77

Gene Ontology
Accession Description Type Code Evidence Reference Synonym
GO:0008415 acyltransferase function ISS TIGR_Ath1:annotation INTERPRO:IPR001099

Protein Domain Analysis
Accession Description Score
No HMM data available

Signal-P Analysis
Prediction SA Probability SP Probability Cleavage Prob. Position
Signal Anchor 0.772 0.002 0.002 68