![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Glycosyl Hydrolase Family 17 (Anther-Specific Protein, A6) |
| Comment | identical to probable glucan endo-1,3-beta-glucosidase A6 precursor SP:Q06915 from (Arabidopsis thaliana) |
| Classification | Plant Specific |
| TIGR ID | At4g14080 |
| Gene Family based on BLASTCLUST | Family Size: 3 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | glycoside Hydrolase gene Families / glycoside Hydrolase Family 17 |
| MW (TIGR) | 53471.77 |
| pI (TIGR) | 8.6611 |
| EC Analysis (KEGG) | A6 anther-specific protein [3.2.1.39] |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Secretory | .064 | .143 | .536 | 25 | 4 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC152615 | 12 | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 4 (0.05%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 1 (0.00%) |
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| .6265 | .298 | .116 | 0 | -.19 | -.7975 | ||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 9.09 | 8.81 | 0 | o |
| Category Number | Description | Hitcode | P-value |
| 01.05.01 | C-Compound And Carbohydrate Utilization | At4g14080 | 0.0 |
| 01.04.01 | Phosphate Utilization | At4g29360 | 1e-156 |
| 30.01 | Cell Wall | At5g20870 | 1e-141 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0004553 | hydrolase\, hydrolyzing O-glycosyl compounds | function | ISS | TIGR_Ath1:annotation | INTERPRO:IPR000490 | O-glucosyl hydrolase |
| Accession | Description | Score |
| PF00332 | Glycosyl hydrolases family 17 | 611.8 |
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Signal Peptide | 0.000 | 1.000 | 0.663 | 21 |