![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Ethylene-Insensitive 2 (Ein2) |
| Comment | identical to EIN2 (Arabidopsis thaliana) gi|5231113|gb|AAD41076; member of the natural resistance-associated macrophage protein (NRAMP) metal transporter family, PMID:11500563; metal transport capacity has not been shown, PMID:11500563, PMID:1038174 |
| Classification | Eukaryotes and Bacteria |
| TIGR ID | At5g03280 |
| GB | AL163002 |
| Gene Family based on BLASTCLUST | Family Size: 1 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | Membrane proteins / EIN2 |
| MW (TIGR) | 140956.11 |
| pI (TIGR) | 5.8674 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Not Defined | .019 | .213 | .314 | N/A | 5 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC150792 | 22 | 1 (0.01%) | 5 (0.02%) | 0 (0.00%) | 1 (0.01%) | 0 (0.00%) | 5 (0.08%) | 0 (0.00%) | 6 (0.01%) |
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| No microarray data available | |||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 239.26 | 30.99 | 11 | i13-33o53-75i96-118o128-150i157-176o196-218i238-260o288-310i331-350o354-376i396-418o |
| Category Number | Description | Hitcode | P-value |
| 03.01.05.01 | Dna Repair | At5g03280 | 0.0 |
| 25.03 | Plant Development | At5g03280 | 0.0 |
| 10.05 | Transmembrane Signal Transduction | At5g03280 | 0.0 |
| 08 | Cellular Transport And Transport Mechanisms | K11G12.4 | 1e-139 |
| 40 | Subcellular Localisation | K11G12.4 | 1e-139 |
| 67 | Transport Facilitation | K11G12.4 | 1e-139 |
| 40.02 | Plasma Membrane | gi_7300692 | 1e-138 |
| 13.11 | Cellular Sensing And Response | IPI00026556 | 1e-129 |
| 20.25.16 | Immune Response | IPI00026556 | 1e-129 |
| 67.04 | Ion Transporters | IPI00026556 | 1e-129 |
| 11.01 | Stress Response | IPI00026556 | 1e-129 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0006979 | oxidative stress response | process | TAS | PMID:10381874 | ||
| GO:0009871 | ethylene mediated signaling pathway (jasmonic acid/ethylene dependent systemic resistance) | process | TAS | PMID:11418339 | ||
| GO:0009871 | ethylene mediated signaling pathway (jasmonic acid/ethylene dependent systemic resistance) | process | TAS | TAIR:Publication:501680569 |
| Accession | Description | Score |
| No HMM data available | ||
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Non-Secretory Protein | 0.077 | 0.104 | 0.040 | 35 |