Protein Properties
Description Katanin P80 Subunit - Like Protein
Comment katanin p80 subunit, Strongylocentrotus purpuratus, EMBL:AF052433
Classification Common To All
TIGR ID At5g08390
GB AL392174
Gene Family based on BLASTCLUST Family Size: 1
Expert gene family (data source: TAIR)
(Super Gene Family / Gene Family)		 Membrane proteins / Katanin p80 subunit - like
MW (TIGR) 95447.2
pI (TIGR) 8.4688
EC Analysis (KEGG) N/A
External Links [TIGR]  [MIPS]  [TAIR]  [SIGnAL]

Subcellular Localization (TargetP Prediction)
Localization Chloroplast
Score		 Mitochondrial
Score		 Secretory
Score		 Signal Length Reliability Class
Secretory .001 .027 .938 31 3

Gene Expression in different plant organs
EST data
Singleton Total # ESTs Seeds Roots Leaves Flowers Siliques Seedlings Cell Suspension Mixed Tissues
NP236400|AL392174.1|CAC08339.1 1 No EST Breakdown Available
AFGC microarray data (Log2 of normalized ratio)
Flower vs. Leaves Stem vs. Ref. Silique vs. Ref. Root vs. Ref. Flower vs. Ref. Leaf vs. Ref.
No microarray data available

Membrane/Soluble (TMHMM Prediction)
Location Expected # of AA Expected # of AA in first 60 Predicted Helices Topology
soluble 42.67 35.21 2 o4-23i44-66o

MIPS Automatic Functional Classification
Category Number Description Hitcode P-value
03.03 Cell Cycle IPI00025192 1e-136
13.05 Cell Motility IPI00025192 1e-136
30.04 Cytoskeleton IPI00025192 1e-136
40.04.05 Microtubule Cytoskeleton IPI00025192 1e-136
63.19 Nucleotide Binding IPI00025192 1e-136
40.10 Nucleus IPI00025192 1e-136

Gene Ontology
Accession Description Type Code Evidence Reference Synonym
No Gene Ontology data available

Protein Domain Analysis
Accession Description Score
No HMM data available

Signal-P Analysis
Prediction SA Probability SP Probability Cleavage Prob. Position
Signal Peptide 0.073 0.924 0.387 23