![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Mitochondrial Carrier Protein Family |
| Comment | contains Pfam profile: PF00153 mitochondrial carrier protein |
| Classification | Eukaryotes |
| TIGR ID | At5g09470 |
| GB | AL391712 |
| Gene Family based on BLASTCLUST | Family Size: 3 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | Membrane proteins / Uncoupling protein family |
| MW (TIGR) | 36096 |
| pI (TIGR) | 10.225 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Not Defined | .072 | .02 | .115 | N/A | 3 |
| EST data | |||||||||
| Singleton | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| NP236000|AL391712.1|CAC05473.1 | 1 | No EST Breakdown Available | |||||||
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| No microarray data available | |||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 23.35 | 2.33 | 0 | o |
| Category Number | Description | Hitcode | P-value |
| 08.04 | Mitochondrial Transport | At5g09470 | 7e-83 |
| 40.16 | Mitochondrion | At5g09470 | 7e-83 |
| 67 | Transport Facilitation | gi_7301942 | 3e-68 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0005743 | mitochondrial inner membrane | component | ISS | TIGR_Ath1:annotation | INTERPRO:IPR001993 | cristae |
| GO:0006839 | mitochondrial transport | process | ISS | TIGR_Ath1:annotation | INTERPRO:IPR001993 | |
| GO:0015302 | uncoupling protein | function | ISS | TAIR:Communication:1674994 |
| Accession | Description | Score |
| No HMM data available | ||
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Signal Peptide | 0.016 | 0.652 | 0.479 | 20 |