![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | 14-3-3 Protein Gf14 Upsilon (Grf5) |
| Comment | identical to 14-3-3 protein GF14 upsilon GI:2232148 from (Arabidopsis thaliana) |
| Classification | Eukaryotes |
| TIGR ID | At5g16050 |
| GB | AL391145 |
| Gene Family based on BLASTCLUST | Family Size: 14 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | Ca-binding proteins / 14-3-3s; NA / 14-3-3 proteins |
| MW (TIGR) | 30181.8 |
| pI (TIGR) | 4.4468 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Not Defined | .202 | .074 | .14 | N/A | 2 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC161315 | 25 | 0 (0.00%) | 3 (0.01%) | 1 (0.03%) | 1 (0.01%) | 1 (0.01%) | 0 (0.00%) | 0 (0.00%) | 4 (0.01%) |
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| .657 | .5565 | .506 | .395 | -.1365 | -.3555 | ||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | .04 | 0 | 0 | o |
| Category Number | Description | Hitcode | P-value |
| 10.01.01 | Unspecified Signal Transduction | At5g16050 | 1e-124 |
| 10.01 | Intracellular Signalling | IPI00000816 | 1e-116 |
| 63.01 | Protein Binding | IPI00000816 | 1e-116 |
| 04.05.01.04 | Transcriptional Control | At5g10450 | 1e-115 |
| 20.25.01 | Animal Sensory Mechanisms | c8001086 | 1e-113 |
| 62.01.07 | Binding / Dissociation | c8001086 | 1e-113 |
| 63.17.01 | Calcium Binding | c8001086 | 1e-113 |
| 40.03 | Cytoplasm | c8001086 | 1e-113 |
| 20.25.07.03 | Effect On Homeostasis (E.G. Metabolism Or Electrolyte Homeostasis) | c8001086 | 1e-113 |
| 62.02.01 | Enzymatic Activity Regulation / Enzyme Regulator | c8001086 | 1e-113 |
| 63.13.03 | Fatty Acid Binding (Eg Acyl-Carrier Protein) | c8001086 | 1e-113 |
| 62.01.01 | Modification | c8001086 | 1e-113 |
| 43.03.13 | Neuron | c8001086 | 1e-113 |
| 43.03.99 | Other Animal Cell Type Localisation | c8001086 | 1e-113 |
| 20.25.07.99 | Other Hormonal Response Activity | c8001086 | 1e-113 |
| 63.02 | Peptide Binding | c8001086 | 1e-113 |
| 62.02.07 | Regulator Of Receptor Activity | c8001086 | 1e-113 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0005635 | nuclear membrane | component | IDA | TAIR:Publication:501681748 | nuclear envelope | |
| GO:0005737 | cytoplasm | component | IDA | TAIR:Publication:501681748 | ||
| GO:0005886 | plasma membrane | component | IDA | TAIR:Publication:501681748 | cell membrane | |
| GO:0005886 | plasma membrane | component | IDA | TAIR:Publication:501681748 | cytoplasmic membrane | |
| GO:0007165 | signal transduction | process | TAS | PMID:10631267 | ||
| GO:0009570 | chloroplast stroma | component | IDA | PMID:9276953 |
| Accession | Description | Score |
| No HMM data available | ||
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Non-Secretory Protein | 0.000 | 0.000 | 0.000 | 22 |