![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Endomembrane Protein 70, Putative |
| Comment | p76, Homo sapiens, EMBL:HSU81006 |
| Classification | Eukaryotes |
| TIGR ID | At5g35160 |
| GB | AF080121 |
| Gene Family based on BLASTCLUST | Family Size: 7 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | Membrane proteins / Putative endosomal protein family |
| MW (TIGR) | 71053.39 |
| pI (TIGR) | 8.111 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Secretory | .012 | .077 | .913 | 25 | 1 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC152913 | 11 | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 3 (0.02%) | 2 (0.03%) | 0 (0.00%) | 1 (0.00%) |
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| No microarray data available | |||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 227.45 | 20.43 | 10 | i5-27o260-282i327-349o359-381i402-424o434-456i484-506o516-538i551-573o593-615i |
| Category Number | Description | Hitcode | P-value |
| 08 | Cellular Transport And Transport Mechanisms | IPI00021985 | 0.0 |
| 67.01 | Channel / Pore Class Transporters | c13000806 | 0.0 |
| 40.22 | Endosome | gi_7298085 | 0.0 |
| 40.02 | Plasma Membrane | IPI00018415 | 0.0 |
| 40 | Subcellular Localisation | IPI00021985 | 0.0 |
| 67 | Transport Facilitation | IPI00021985 | 0.0 |
| 08.07 | Vesicular Transport (Golgi Network, Etc.) | YDR107c | 0.0 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0016021 | integral membrane protein | component | ISS | TIGR_Ath1:annotation | SWISS-PROT:P58021 |
| Accession | Description | Score |
| PF02990 | Endomembrane protein 70 | 788.3 |
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Signal Peptide | 0.003 | 0.995 | 0.963 | 20 |