![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
| Home | Advanced Search | Locus Search | Search by Gene Family | |
| Description | Auxin-Independent Growth Promoter-Related Protein |
| Comment | N/A |
| Classification | Plant Specific |
| TIGR ID | At5g63390 |
| GB | AB023035 |
| Gene Family based on BLASTCLUST | Family Size: 3 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | Membrane proteins / axi 1-like family |
| MW (TIGR) | 62890.59 |
| pI (TIGR) | 10.2958 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Chloroplast | .569 | .105 | .002 | 33 | 3 |
| EST data | |||||||||
| Singleton | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| NP231515|AB007649.1|BAB08804.1 | 1 | No EST Breakdown Available | |||||||
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| No microarray data available | |||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 26.72 | 10.2 | 1 | i53-72o |
| Category Number | Description | Hitcode | P-value |
| 14.01.05 | Growth Regulators / Regulation Of Cell Size | At5g01100 | 0.0 |
| 11.01 | Stress Response | At4g24530 | 1e-162 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| No Gene Ontology data available | ||||||
| Accession | Description | Score |
| PF03138 | Plant protein family | 516.9 |
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Signal Anchor | 0.986 | 0.011 | 0.003 | 87 |