Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University
| The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | Glycosyl Hydrolase Family 31 |
| Comment | similar to alpha-glucosidase GI:2648032 from (Solanum tuberosum) |
| Classification | Common To All |
| TIGR ID | At5g63840 |
| GB | AB007646 |
| Gene Family based on BLASTCLUST | Family Size: 1 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | glycoside Hydrolase gene Families / glycoside Hydrolase Family 31 |
| MW (TIGR) | 104274.36 |
| pI (TIGR) | 6.2035 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Secretory | .304 | .075 | .554 | 26 | 4 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC162432 | 19 | 1 (0.01%) | 2 (0.01%) | 0 (0.00%) | 0 (0.00%) | 2 (0.02%) | 0 (0.00%) | 0 (0.00%) | 7 (0.02%) |
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| 1.00575 | .8865 | .5065 | .45175 | -.01925 | -.10125 | ||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | .12 | .09 | 0 | o |
| Category Number | Description | Hitcode | P-value |
| 01.05 | C-Compound And Carbohydrate Metabolism | IPI00005595 | 0.0 |
| 01.05.01 | C-Compound And Carbohydrate Utilization | At5g11720 | 0.0 |
| 01.05.01.01 | C-Compound, Carbohydrate Catabolism | At3g45940 | 0.0 |
| 40.07 | Endoplasmic Reticulum | YBR229c | 0.0 |
| 02 | Energy | IPI00020024 | 0.0 |
| 02.01 | Glycolysis And Gluconeogenesis | c17002136 | 0.0 |
| 02.19 | Metabolism Of Energy Reserves (E.G. Glycogen, Trehalose) | YBR229c | 0.0 |
| 01.05.01.01.02 | Polysaccharide Degradation | c17002136 | 0.0 |
| 06.04 | Protein Targeting, Sorting And Translocation | F40F9.6B | 0.0 |
| 40 | Subcellular Localisation | F40F9.6B | 0.0 |
| 63.13.01 | Sugar Binding | c17002136 | 0.0 |
| 40.25 | Vacuole Or Lysosome | IPI00020024 | 0.0 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0004553 | hydrolase\, hydrolyzing O-glycosyl compounds | function | ISS | TIGR_Ath1:annotation | INTERPRO:IPR000322 | O-glucosyl hydrolase |
| Accession | Description | Score |
| PF01055 | Glycosyl hydrolases family 31 | 1110.4 |
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Signal Peptide | 0.000 | 1.000 | 0.765 | 20 |