![]() | The Plant Specific Database Created by the Bioinformatics Core of the Genomics Technology Support Facility at Michigan State University | |||
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| Description | 3-Hydroxyisobutyryl-Coenzyme A Hydrolase (Coa-Thioester Hydrolase) (Chy1) |
| Comment | identical to gi:8572760; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein |
| Classification | Common To All |
| TIGR ID | At5g65940 |
| GB | AB018108 |
| Gene Family based on BLASTCLUST | Family Size: 6 |
| Expert gene family (data source: TAIR) (Super Gene Family / Gene Family) | Acyl-lipid metabolism / Hydroxyisobutyryl-CoA Hydrolase; Membrane proteins / 3-hydroxyisobutyryl-coenzyme A hydrolase family |
| MW (TIGR) | 42073.37 |
| pI (TIGR) | 8.2684 |
| EC Analysis (KEGG) | N/A |
| External Links | [TIGR] [MIPS] [TAIR] [SIGnAL] |
| Localization | Chloroplast Score | Mitochondrial Score | Secretory Score | Signal Length | Reliability Class |
| Not Defined | .196 | .077 | .163 | N/A | 3 |
| EST data | |||||||||
| TC | Total # ESTs | Seeds | Roots | Leaves | Flowers | Siliques | Seedlings | Cell Suspension | Mixed Tissues |
| TC155252 | 6 | 0 (0.00%) | 2 (0.01%) | 0 (0.00%) | 1 (0.01%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) | 0 (0.00%) |
| AFGC microarray data (Log2 of normalized ratio) | |||||||||
| Flower vs. Leaves | Stem vs. Ref. | Silique vs. Ref. | Root vs. Ref. | Flower vs. Ref. | Leaf vs. Ref. | ||||
| No microarray data available | |||||||||
| Location | Expected # of AA | Expected # of AA in first 60 | Predicted Helices | Topology |
| soluble | 2.79 | .04 | 0 | o |
| Category Number | Description | Hitcode | P-value |
| 01.06.01 | Lipid, Fatty-Acid And Isoprenoid Biosynthesis | At4g31810 | 1e-118 |
| 01 | Metabolism | IPI00023517 | 1e-112 |
| 25.05 | Animal Development | F09F7.4 | 1e-109 |
| 14.04 | Cell Differentiation | F09F7.4 | 1e-109 |
| 01.06.04 | Breakdown Of Lipids, Fatty Acids And Isoprenoids | At3g60510 | 1e-108 |
| 40.16 | Mitochondrion | gi_7303265 | 2e-61 |
| Accession | Description | Type | Code | Evidence | Reference | Synonym |
| GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase | function | IGI | PMID:11404361 | NCBI_gi:13636047 | |
| GO:0005777 | peroxisome | component | ISS | PMID:11404361 | PMID:2654139 | |
| GO:0006574 | valine catabolism | process | IDA | PMID:11404361 | ||
| GO:0006635 | fatty acid beta-oxidation | process | TAS | PMID:11404361 |
| Accession | Description | Score |
| PF00378 | enoyl-CoA hydratase/isomerase family protein | 75.4 |
| Prediction | SA Probability | SP Probability | Cleavage Prob. | Position |
| Non-Secretory Protein | 0.000 | 0.000 | 0.000 | 18 |